Watt = Volts x Amps. So your 36v X 5.5A panels output 198W(maximum).
If you put them in parallel as you indicated, e.g. for a 12V battery system, you need a charge controller with a capacity of 5.5A and a maximum of 36V (lets say 50V to be safe). If you were to put them in series, e.g. for a...